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Publications

Pub Year

Pubs by Year

Weighted RCR by Year

Median RCR by Year

Total Citations by Publication Year

Citations per Pub by Year

Total Citations by Year Cited

2021

1

0.3

0.3

4

4

1

2022

5

21.7

6.18

182

36.4

7

2023

30

102.91

1.26

381

12.7

173

2024

35

14.48

3.97

50

1.43

436

Average

17.8

34.8

2.9

154.3

13.6

154.3

Overall Median RCR = 1.41

 

PMIDCitation
36198801

Su, H., Yang, F., Fu, R., Trinh, B., Sun, N., Liu, J., ... & Karin, M. (2022). Collagenolysis-dependent DDR1 signalling dictates pancreatic cancer outcome. Nature, 610(7931), 366-72.

36198802

Filliol, A., Saito, Y., Nair, A., Dapito, D.H., Yu, L.X., Ravichandra, A., ... & Schwabe, R.F. (2022). Opposing roles of hepatic stellate cell subpopulations in hepatocarcinogenesis. Nature, 610(7931), 356-65.

36450797

Saha, S., Moon, H.R., Han, B., & Mugler, A. (2022). Deduction of signaling mechanisms from cellular responses to multiple cues. NPJ systems biology and applications, 8(1), 48.

36524874

Moon, H.R., Saha, S., Mugler, A., & Han, B. (2023). Cells function as a ternary logic gate to decide migration direction under integrated chemical and fluidic cues. Lab on a chip, 23(4), 631-44.

36712058

Carpenter, E.S., Elhossiny, A.M., Kadiyala, P., Li, J., McGue, J., Griffith, B., ... & Di Magliano, M.P. (2023). Analysis of donor pancreata defines the transcriptomic signature and microenvironment of early pre-neoplastic pancreatic lesions. bioRxiv : the preprint server for biology, 2023.01.13.523300.

36727849

Menjivar, R.E., Nwosu, Z.C., Du, W., Donahue, K.L., Hong, H.S., Espinoza, C., ... & Pasca di Magliano, M. (2023). Arginase 1 is a key driver of immune suppression in pancreatic cancer. eLife, 12, e80721.

36881882

Ventre, K.S., Roehle, K., Bello, E., Bhuiyan, A.M., Biary, T., Crowley, S.J., ... & Dougan, S.K. (2023). cIAP1/2 Antagonism Induces Antigen-Specific T Cell-Dependent Immunity. Journal of immunology (Baltimore, Md. : 1950), 210(7), 991-1003.

36997301

Cephas, A.T., Hwang, W.L., Maitra, A., Parnas, O., & DelGiorno, K.E. (2023). It is better to light a candle than to curse the darkness: single-cell transcriptomics sheds new light on pancreas biology and disease. Gut, 72(6), 1211-9.

37021392

Carpenter, E.S., Elhossiny, A.M., Kadiyala, P., Li, J., McGue, J., Griffith, B.D., ... & Pasca di Magliano, M. (2023). Analysis of Donor Pancreata Defines the Transcriptomic Signature and Microenvironment of Early Neoplastic Lesions. Cancer discovery, 13(6), 1324-45.

37040757

Young, A.M., Van Buren, S., & Rashid, N.U. (2024). Differential transcript usage analysis incorporating quantification uncertainty via compositional measurement error regression modeling. Biostatistics (Oxford, England), 25(2), 559-76.

37059070

Halbrook, C.J., Lyssiotis, C.A., Pasca di Magliano, M., & Maitra, A. (2023). Pancreatic cancer: Advances and challenges. Cell, 186(8), 1729-54.

37068522

Shen, Y., Yuk, S.A., Kwon, S., Tamam, H., Yeo, Y., & Han, B. (2023). A timescale-guided microfluidic synthesis of tannic acid-FeIII network nanocapsules of hydrophobic drugs. Journal of controlled release : official journal of the Controlled Release Society, 357, 484-97.

37074910

Liu, S.Y., Mulugeta, N., Dougan, S.K., & Qiang, L.(in press). In vitro flow cytometry assay to assess primary human and mouse macrophage phagocytosis of live cells. STAR protocols. doi:10.1016/j.xpro.2023.102240

37181357

Mijit, M., Boner, M., Cordova, R.A., Gampala, S., Kpenu, E., Klunk, A.J., ... & Fishel, M.L. (2023). Activation of the integrated stress response (ISR) pathways in response to Ref-1 inhibition in human pancreatic cancer and its tumor microenvironment. Frontiers in medicine, 10, 1146115.

37263309

Qiang, L., Hoffman, M.T., Ali, L.R., Castillo, J.I., Kageler, L., Temesgen, A., ... & Dougan, S.K. (2023). Transforming Growth Factor-β Blockade in Pancreatic Cancer Enhances Sensitivity to Combination Chemotherapy. Gastroenterology, 165(4), 874-890.e10.

37330519

Gupta, K., Moon, H.R., Chen, Z., Han, B., Green, N.G., & Wereley, S.T. (2023). Optically induced electrothermal microfluidic tweezers in bio-relevant media. Scientific reports, 13(1), 9819.

37344102

Cardot-Ruffino, V., Bollenrucher, N., Delius, L., Wang, S.J., Brais, L.K., Remland, J., ... & Dougan, S.K. (2023). G-CSF rescue of FOLFIRINOX-induced neutropenia leads to systemic immune suppression in mice and humans. Journal for immunotherapy of cancer, 11(6), e006589.

37385282

Affo, S., Filliol, A., Gores, G.J., & Schwabe, R.F. (2023). Fibroblasts in liver cancer: functions and therapeutic translation. The lancet. Gastroenterology & hepatology, 8(8), 748-59.

37498558

Leary, J.R., Xu, Y., Morrison, A.B., Jin, C., Shen, E.C., Kuhlers, P.C., ... & Peng, X.L. (2023). Sub-Cluster Identification through Semi-Supervised Optimization of Rare-Cell Silhouettes (SCISSORS) in single-cell RNA-sequencing. Bioinformatics (Oxford, England), 39(8), btad449.

37577663

Joisa, C.U., Chen, K.A., Beville, S., Stuhlmiller, T., Berginski, M.E., Okumu, D., ... & Gomez, S.M. (2023). Combined kinome inhibition states are predictive of cancer cell line sensitivity to kinase inhibitor combination therapies. bioRxiv : the preprint server for biology, 2023.08.01.551346.

37691883

Cheng, C., Deneke, N., Moon, H.R., Choi, S.R., Ospina-Muñoz, N., Elzey, B.D., ... & Han, B. (2023). Inkjet-printed morphogenesis of tumor-stroma interface using bi-cellular bioinks of collagen-poly(N-isopropyl acrylamide-co-methyl methacrylate) mixture. Materials today. Advances, 19, 100408.

37709651

Su, H., & Karin, M. (2024). Multifaceted collagen-DDR1 signaling in cancer. Trends in cell biology, 34(5), 406-15.

37722040

Rogers, S., Zhang, C., Anagnostidis, V., Liddle, C., Fishel, M.L., Gielen, F., & Scholpp, S. (2023). Cancer-associated fibroblasts influence Wnt/PCP signaling in gastric cancer cells by cytoneme-based dissemination of ROR2. Proceedings of the National Academy of Sciences of the United States of America, 120(39), e2217612120.

37851080

Carpenter, E.S., Kadiyala, P., Elhossiny, A.M., Kemp, S.B., Li, J., Steele, N.G., ... & Pasca Di Magliano, M. (2024). KRT17high/CXCL8+ Tumor Cells Display Both Classical and Basal Features and Regulate Myeloid Infiltration in the Pancreatic Cancer Microenvironment. Clinical cancer research : an official journal of the American Association for Cancer Research, 30(11), 2497-513.

37884051

Silva, L.L., Stratford, R.E., Messmann, R., Kelley, M.R., & Quinney, S.K. (2024). Bridging population pharmacokinetic and semimechanistic absorption modeling of APX3330. CPT: pharmacometrics & systems pharmacology, 13(1), 106-17.

37894284

Li, K., Huo, Q., Minami, K., Tamari, K., Ogawa, K., Na, S., ... & Yokota, H. (2023). Exploring the Tumor-Suppressing Potential of PSCA in Pancreatic Ductal Adenocarcinoma. Cancers, 15(20), 4917.

37896207

Cui, C., Huo, Q., Xiong, X., Li, K., Fishel, M.L., Li, B., & Yokota, H. (2023). Anticancer Peptides Derived from Aldolase A and Induced Tumor-Suppressing Cells Inhibit Pancreatic Ductal Adenocarcinoma Cells. Pharmaceutics, 15(10), 2447.

37950862

Decker-Farrell, A.R., Ma, A., Li, F., Muir, A., & Olive, K.P. (2023). Generation and ex vivo culture of murine and human pancreatic ductal adenocarcinoma tissue slice explants. STAR protocols, 4(4), 102711.

37966260

Hasselluhn, M.C., Decker-Farrell, A.R., Vlahos, L., Thomas, D.H., Curiel-Garcia, A., Maurer, H.C., ... & Olive, K.P. (2024). Tumor Explants Elucidate a Cascade of Paracrine SHH, WNT, and VEGF Signals Driving Pancreatic Cancer Angiosuppression. Cancer discovery, 14(2), 348-61.

37971174

Chowdhury, N.N., Yang, Y., Dutta, A., Luo, M., Wei, Z., Abrahams, S.R., ... & Flick, M.J. (2024). Plasminogen deficiency suppresses pancreatic ductal adenocarcinoma disease progression. Molecular oncology, 18(1), 113-35.

38000024

Kureshi, R., Bello, E., Kureshi, C.T.S., Walsh, M.J., Lippert, V., Hoffman, M.T., ... & Dougan, S.K. (2023). DGKα/ζ inhibition lowers the TCR affinity threshold and potentiates antitumor immunity. Science advances, 9(47), eadk1853.

38015750

Barravecchia, I., Lee, J.M., Manassa, J., Magnuson, B., Ferris, S.F., Cavanaugh, S., ... & Galban, S. (2024). Modeling Molecular Pathogenesis of Idiopathic Pulmonary Fibrosis-Associated Lung Cancer in Mice. Molecular cancer research : MCR, 22(3), 295-307.

38025707

Joisa, C.U., Chen, K.A., Berginski, M.E., Golitz, B.T., Jenner, M.R., Herrera Loeza, G., ... & Gomez, S.M. (2023). Integrated single-dose kinome profiling data is predictive of cancer cell line sensitivity to kinase inhibitors. PeerJ, 11, e16342.

38040420

Katz, M.H.G., Petroni, G.R., Bauer, T., Reilley, M.J., Wolpin, B.M., Stucky, C.C., ... & Rahma, O. (2023). Multicenter randomized controlled trial of neoadjuvant chemoradiotherapy alone or in combination with pembrolizumab in patients with resectable or borderline resectable pancreatic adenocarcinoma. Journal for immunotherapy of cancer, 11(12), e007586.

38056311

Mijit, M., Kpenu, E., Chowdhury, N.N., Gampala, S., Wireman, R., Liu, S., ... & Kelley, M.R. (2024). In vitro and In vivo evidence demonstrating chronic absence of Ref-1 Cysteine 65 impacts Ref-1 folding configuration, redox signaling, proliferation and metastasis in pancreatic cancer. Redox biology, 69, 102977.

38083968

Shen, Y., Gwak, H., & Han, B. (2024). Advanced manufacturing of nanoparticle formulations of drugs and biologics using microfluidics. The Analyst, 149(3), 614-37.

38105998

Wasko, U.N., Jiang, J., Curiel-Garcia, A., Wang, Y., Lee, B., Orlen, M., ... & Olive, K.P. (2023). Tumor-selective effects of active RAS inhibition in pancreatic ductal adenocarcinoma. bioRxiv : the preprint server for biology, 2023.12.03.569791.

38113333

Schaefer, A., Hodge, R.G., Zhang, H., Hobbs, G.A., Dilly, J., Huynh, M.V., ... & Der, C.J. (2023). RHOAL57V drives the development of diffuse gastric cancer through IGF1R-PAK1-YAP1 signaling. Science signaling, 16(816), eadg5289.

38152402

Griffith, B.D., Lazarus, J., McGue, J., Krishnan, S., D'Angelica, M.I., Shia, J., ... & Frankel, T.L. (2023). Unique characteristics of the tumor immune microenvironment in young patients with metastatic colorectal cancer. Frontiers in immunology, 14, 1289402.

38160286

Joisa, C.U., Chen, K.A., Beville, S., Stuhlmiller, T., Berginski, M.E., Okumu, D., ... & Gomez, S.M. (2024). Combined kinome inhibition states are predictive of cancer cell line sensitivity to kinase inhibitor combination therapies. Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 29, 276-90.

38162229

Moon, H.R., Surianarayanan, N., Singh, T., & Han, B. (2023). Microphysiological systems as reliable drug discovery and evaluation tools: Evolution from innovation to maturity. Biomicrofluidics, 17(6), 061504.

38168289

Benitz, S., Steep, A., Nasser, M., Preall, J., Mahajan, U.M., McQuithey, H., ... & Crawford, H.C. (2024). ROR2 regulates cellular plasticity in pancreatic neoplasia and adenocarcinoma. bioRxiv : the preprint server for biology, 2023.12.13.571566.

38218213

Gomez, S.M., Axtman, A.D., Willson, T.M., Major, M.B., Townsend, R.R., Sorger, P.K., & Johnson, G.L. (2024). Illuminating function of the understudied druggable kinome. Drug discovery today, 29(3), 103881.

38233984

Kearney, J.F., Trembath, H.E., Chan, P.S., Morrison, A.B., Xu, Y., Luan, C.F., ... & Yeh, J.J. (2024). Myofibroblastic cancer-associated fibroblast subtype heterogeneity in pancreatic cancer. Journal of surgical oncology, 129(5), 860-8.

38271694

Antonucci, L., & Karin, M. (2024). The Past and Future of Inflammation as a Target to Cancer Prevention. Cancer prevention research (Philadelphia, Pa.), 17(4), 141-55.

38272561

Huffman, B.M., Singh, H., Ali, L.R., Horick, N., Wang, S.J., Hoffman, M.T., ... & Cleary, J.M. (2024). Biomarkers of pembrolizumab efficacy in advanced anal squamous cell carcinoma: analysis of a phase II clinical trial and a cohort of long-term responders. Journal for immunotherapy of cancer, 12(1), e008436.

38311014

Gampala, S., Moon, H.R., Wireman, R., Peil, J., Kiran, S., Mitchell, D.K., ... & Fishel, M.L. (2024). New Ref-1/APE1 targeted inhibitors demonstrating improved potency for clinical applications in multiple cancer types. Pharmacological research, 201, 107092.

38325760

Aney, K.J., Jeong, W.J., Vallejo, A.F., Burdziak, C., Chen, E., Wang, A., ... & Nissim, S. (2024). Novel Approach for Pancreas Transcriptomics Reveals the Cellular Landscape in Homeostasis and Acute Pancreatitis. Gastroenterology, 166(6), 1100-13.

38405804

Salas-Escabillas, D.J., Hoffman, M.T., Moore, J.S., Brender, S.M., Wen, H.J., Benitz, S., ... & Crawford, H.C. (2024). Tuft cells transdifferentiate to neural-like progenitor cells in the progression of pancreatic cancer. bioRxiv : the preprint server for biology, 2024.02.12.579982.

38474199

Enzler, T., Shi, J., McGue, J., Griffith, B.D., Sun, L., Sahai, V., ... & Frankel, T.L. (2024). A Comparison of Spatial and Phenotypic Immune Profiles of Pancreatic Ductal Adenocarcinoma and Its Precursor Lesions. International journal of molecular sciences, 25(5), 2953.

38497825

Heiling, H.M., Rashid, N.U., Li, Q., Peng, X.L., Yeh, J.J., & Ibrahim, J.G. (2024). Efficient computation of high-dimensional penalized generalized linear mixed models by latent factor modeling of the random effects. Biometrics, 80(1), ujae016.

38585224

Kirchoff, K.E., Wellnitz, J., Hochuli, J.E., Maxfield, T., Popov, K.I., Gomez, S., & Tropsha, A. (2024). Utilizing Low-Dimensional Molecular Embeddings for Rapid Chemical Similarity Search. Advances in information retrieval : ... European Conference on IR Research, ECIR ... proceedings. European Conference on IR Research, 14609, 34-49.

38588697

Wasko, U.N., Jiang, J., Dalton, T.C., Curiel-Garcia, A., Edwards, A.C., Wang, Y., ... & Olive, K.P. (2024). Tumour-selective activity of RAS-GTP inhibition in pancreatic cancer. Nature, 629(8013), 927-36.

38636130

Asquith, C.R.M., East, M.P., Laitinen, T., Alamillo-Ferrer, C., Hartikainen, E., Wells, C.I., ... & Johnson, G.L. (2024). Discovery and optimization of narrow spectrum inhibitors of Tousled like kinase 2 (TLK2) using quantitative structure activity relationships. European journal of medicinal chemistry, 271, 116357.

38798565

Peng, X.L., Kharitonova, E.V., Xu, Y., Kearney, J.F., Luan, C., Chan, P.S., ... & Yeh, J.J. (2024). Determination of permissive and restraining cancer-associated fibroblast (DeCAF) subtypes. bioRxiv : the preprint server for biology, 2024.05.14.594197.

38818017

Heiling, H.M., Rashid, N.U., Li, Q., & Ibrahim, J.G. (2023). glmmPen: High Dimensional Penalized Generalized Linear Mixed Models. The R journal, 15(4), 106-28.

38887930

Lee, J.J., Kearney, J.F., Trembath, H.E., Hariharan, A., LaBella, M.E., Kharitonova, E.V., ... & Yeh, J.J. (2024). Tumor-intrinsic and Cancer-associated Fibroblast Subtypes Independently Predict Outcomes in Pancreatic Cancer. Annals of surgery, 280(4), 659-66.

38958646

Donahue, K.L., Watkoske, H.R., Kadiyala, P., Du, W., Brown, K., Scales, M.K., ... & Pasca di Magliano, M. (2024). Oncogenic KRAS-Dependent Stromal Interleukin-33 Directs the Pancreatic Microenvironment to Promote Tumor Growth. Cancer discovery, 14(10), 1964-89.

38975024

Cheng, C., Williamson, E.J., Chiu, G.T., & Han, B. (2024). Engineering biomaterials by inkjet printing of hydrogels with functional particulates. Med-X, 2(1), 9.

38975874

Dilly, J., Hoffman, M.T., Abbassi, L., Li, Z., Paradiso, F., Parent, B.D., ... & Aguirre, A.J. (2024). Mechanisms of Resistance to Oncogenic KRAS Inhibition in Pancreatic Cancer. Cancer discovery, 14(11), 2135-61.

38975886

Benitz, S., Steep, A., Nasser, M.M., Preall, J., Mahajan, U.M., McQuithey, H., ... & Crawford, H.C. (2024). ROR2 Regulates Cellular Plasticity in Pancreatic Neoplasia and Adenocarcinoma. Cancer discovery, 14(11), 2162-82.

38990554

Oberstein, P.E., Dias Costa, A., Kawaler, E.A., Cardot-Ruffino, V., Rahma, O.E., Beri, N., ... & Dougan, S.K. (2024). Blockade of IL1β and PD1 with Combination Chemotherapy Reduces Systemic Myeloid Suppression in Metastatic Pancreatic Cancer with Heterogeneous Effects in the Tumor. Cancer immunology research, 12(9), 1221-35.

38991191

Somasundaram, A., & Yeh, J.J. (2024). Future of Dendritic Cell-Based Approaches in Pancreatic Cancer. Journal of clinical oncology : official journal of the American Society of Clinical Oncology, 42(26), 3067-70.

39181865

Jiang, J., Liu, Y., Qin, J., Chen, J., Wu, J., Pizzi, M.P., ... & Wang, L. (2024). METI: deep profiling of tumor ecosystems by integrating cell morphology and spatial transcriptomics. Nature communications, 15(1), 7312.

39182611

Sun, L., Verhaegen, M.E., McGue, J., Olivei, A.C., Dlugosz, A.A., Frankel, T.L., & Harms, P.W. (2024). Development of a Multiplex Immunofluorescence Assay for Tumor Microenvironment Studies of Human and Murine Merkel Cell Carcinoma. Laboratory investigation; a journal of technical methods and pathology, 104(10), 102128.

39184956

Lim, D.K., Rashid, N.U., Oliva, J.B., & Ibrahim, J.G. (2024). Deeply-Learned Generalized Linear Models with Missing Data. Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America, 33(2), 638-50.

39237169

Lee, J.J., & Yeh, J.J. (2024). Updates in Molecular Profiling of Pancreatic Ductal Adenocarcinoma. The Surgical clinics of North America, 104(5), 939-50.